arXiv:2510.22289v1 Announce Type: cross Abstract: Homophily, the tendency of nodes from the same class to connect, is a fundamental property of real-world graphs, underpinning structural and semantic patterns in domains such as citation networks and social networks. Existing methods exploit homophily through designing homophily-aware GNN architectures or graph structure learning strategies, yet they primarily focus on GNN learning with training graphs. However, in real-world scenarios, test graphs often suffer from data quality issues and distribution shifts, such as domain shifts across users from different regions in social networks and temporal evolution shifts in citation network graphs collected over varying time periods. These factors significantly compromise the pre-trained model's robustness, resulting in degraded test-time performance. With empirical observations and theoretical analysis, we reveal that transforming the test graph structure by increasing homophily in homophilic graphs or decreasing it in heterophilic graphs can significantly improve the robustness and performance of pre-trained GNNs on node classifications, without requiring model training or update. Motivated by these insights, a novel test-time graph structural transformation method grounded in homophily, named GrapHoST, is proposed. Specifically, a homophily predictor is developed to discriminate test edges, facilitating adaptive test-time graph structural transformation by the confidence of predicted homophily scores. Extensive experiments on nine benchmark datasets under a range of test-time data quality issues demonstrate that GrapHoST consistently achieves state-of-the-art performance, with improvements of up to 10.92%. Our code has been released at https://github.com/YanJiangJerry/GrapHoST.