cs.AI updates on arXiv.org 10月14日 12:18
RetroTrim:改进药物逆合成系统
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本文提出了一种名为RetroTrim的逆合成系统,通过结合多样化的反应评分策略,成功避免了非逻辑方案的出现,并实现了高质量路径的最大化。系统采用新评价协议对药物结构进行测试,旨在提升逆合成系统的可靠性。

arXiv:2510.10645v1 Announce Type: cross Abstract: Retrosynthesis is one of the domains transformed by the rise of generative models, and it is one where the problem of nonsensical or erroneous outputs (hallucinations) is particularly insidious: reliable assessment of synthetic plans is time-consuming, with automatic methods lacking. In this work, we present RetroTrim, a retrosynthesis system that successfully avoids nonsensical plans on a set of challenging drug-like targets. Compared to common baselines in the field, our system is not only the sole method that succeeds in filtering out hallucinated reactions, but it also results in the highest number of high-quality paths overall. The key insight behind RetroTrim is the combination of diverse reaction scoring strategies, based on machine learning models and existing chemical databases. We show that our scoring strategies capture different classes of hallucinations by analyzing them on a dataset of labeled retrosynthetic intermediates. To measure the performance of retrosynthesis systems, we propose a novel evaluation protocol for reactions and synthetic paths based on a structured review by expert chemists. Using this protocol, we compare systems on a set of 32 novel targets, curated to reflect recent trends in drug structures. While the insights behind our methodology are broadly applicable to retrosynthesis, our focus is on targets in the drug-like domain. By releasing our benchmark targets and the details of our evaluation protocol, we hope to inspire further research into reliable retrosynthesis.

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RetroTrim 逆合成系统 药物合成 评分策略 评价协议
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